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ReactionNetworks -- create chemical reaction networks and corresponding steady-state and conservation equations
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createRing -- creates a ring with generators species concentrations, reaction rates, initial values
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crossLinkingModelCelldeath (missing documentation)
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displayComplexes (missing documentation)
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FullEdges (missing documentation)
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glue -- combine two networks
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Input (missing documentation)
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negativeLaplacian -- Computes the negative of the Laplacian matrix of a Reaction Network.
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negativeUndirectedLaplacian -- Computes the negative of the Laplacian matrix of an undirected graph associated with a Reaction Network.
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NullEdges (missing documentation)
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reactantMatrix -- Computes the reactants matrix of a Reaction Network.
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reactionMatrix (missing documentation)
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ReactionNetwork -- a mutable hash table, stores information about a reaction network
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stoichiometricConeKer -- Computes a matrix whose columns are the rays of the cone non-negative kernel of the stoichiometric matrix of a Reaction Network.
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stoichSubspaceKer -- Computes the kernel of the stoichiometric matrix of a Reaction Network.
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subRandomInitVals (missing documentation)
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subRandomReactionRates (missing documentation)
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wnt -- shuttle model for Wnt signaling pathway