readOptions() |   | 53% |   | 45% | 9 | 12 | 22 | 49 | 0 | 1 |
setChadoOptions() |   | 45% |   | 40% | 5 | 6 | 5 | 14 | 0 | 1 |
getDefaultSequenceFileName() |  | 0% |  | 0% | 6 | 6 | 10 | 10 | 1 | 1 |
getDefaultFeatureFileName() |  | 0% |  | 0% | 6 | 6 | 10 | 10 | 1 | 1 |
resetCachedValues() |   | 72% |   | 70% | 3 | 6 | 7 | 31 | 0 | 1 |
static {...} |   | 56% | | n/a | 0 | 1 | 8 | 20 | 0 | 1 |
isBuggyLinuxVM() |  | 0% |  | 0% | 4 | 4 | 9 | 9 | 1 | 1 |
getInvisibleQualifiers(boolean) |  | 0% |  | 0% | 4 | 4 | 7 | 7 | 1 | 1 |
setDirectEdit(boolean) |  | 0% |  | 0% | 4 | 4 | 8 | 8 | 1 | 1 |
setEukaryoticMode(boolean) |  | 0% |  | 0% | 4 | 4 | 8 | 8 | 1 | 1 |
setHighlightActiveEntryFlag(boolean) |  | 0% |  | 0% | 4 | 4 | 8 | 8 | 1 | 1 |
getColorFromColourNumber(int) |   | 46% |   | 37% | 4 | 5 | 5 | 9 | 0 | 1 |
isEukaryoticMode() |   | 36% |   | 12% | 4 | 5 | 4 | 7 | 0 | 1 |
getAllGeneNames() |  | 0% |  | 0% | 2 | 2 | 4 | 4 | 1 | 1 |
getMinimumORFSize() |  | 0% |  | 0% | 2 | 2 | 4 | 4 | 1 | 1 |
setDisplayNameQualifiers(String) |  | 0% | | n/a | 1 | 1 | 4 | 4 | 1 | 1 |
setSystematicQualifierNames(String) |  | 0% | | n/a | 1 | 1 | 4 | 4 | 1 | 1 |
getStartCodons() |   | 78% |   | 66% | 2 | 4 | 2 | 9 | 0 | 1 |
getDisplayQualifierNames() |   | 59% |   | 75% | 1 | 3 | 2 | 7 | 0 | 1 |
getSystematicQualifierNames() |   | 59% |   | 75% | 1 | 3 | 2 | 8 | 0 | 1 |
canDirectEdit() |  | 0% |  | 0% | 2 | 2 | 3 | 3 | 1 | 1 |
highlightActiveEntryFlag() |  | 0% |  | 0% | 2 | 2 | 3 | 3 | 1 | 1 |
isUnixHost() |   | 41% |   | 25% | 2 | 3 | 2 | 4 | 0 | 1 |
readWritePossible() |   | 71% |  | 100% | 0 | 2 | 2 | 7 | 0 | 1 |
isNoddyMode() |  | 0% |  | 0% | 2 | 2 | 1 | 1 | 1 | 1 |
getUndoLevels() |   | 75% |   | 50% | 2 | 3 | 2 | 6 | 0 | 1 |
parseColour(String) |   | 91% | | n/a | 0 | 1 | 2 | 11 | 0 | 1 |
Options() |   | 91% | | n/a | 0 | 1 | 2 | 13 | 0 | 1 |
getDBEntryInformation() |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
setDefaultFeatureColours() |  | 100% |  | 100% | 0 | 2 | 0 | 4 | 0 | 1 |
readQualifierInfo(InputStream, InputStream) |  | 100% |  | 100% | 0 | 6 | 0 | 41 | 0 | 1 |
getExternalPrograms() |  | 100% |   | 78% | 3 | 8 | 0 | 30 | 0 | 1 |
getNCBIPrograms() |  | 100% |   | 70% | 3 | 6 | 0 | 23 | 0 | 1 |
makeArtemisEntryInformation(EntryInformation) |  | 100% |  | 100% | 0 | 6 | 0 | 19 | 0 | 1 |
setDefaultColourMap() |  | 100% | | n/a | 0 | 1 | 0 | 14 | 0 | 1 |
getExtraQualifiers(String) |  | 100% |  | 100% | 0 | 2 | 0 | 10 | 0 | 1 |
makeEntryInformation() |  | 100% |  | 100% | 0 | 2 | 0 | 13 | 0 | 1 |
getPropertyTruthValueInternal(String) |  | 100% |   | 70% | 3 | 6 | 0 | 8 | 0 | 1 |
readSystemOptions() |  | 100% |   | 66% | 2 | 4 | 0 | 10 | 0 | 1 |
fireChangeEvent(String) |  | 100% |  | 100% | 0 | 2 | 0 | 8 | 0 | 1 |
getDefaultFeatureColour(Key) |  | 100% |  | 100% | 0 | 2 | 0 | 4 | 0 | 1 |
reset() |  | 100% | | n/a | 0 | 1 | 0 | 8 | 0 | 1 |
getPropertyValues(Properties, String) |  | 100% |  | 100% | 0 | 2 | 0 | 4 | 0 | 1 |
getIntegerProperty(String) |  | 100% |  | 100% | 0 | 2 | 0 | 4 | 0 | 1 |
setGeneticCode(String) |  | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
addOptionChangeListener(OptionChangeListener) |  | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |
getPropertyTruthValue(String) |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
load(InputStream) |  | 100% | | n/a | 0 | 1 | 0 | 3 | 0 | 1 |
getFontUIResource() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
removeOptionChangeListener(OptionChangeListener) |  | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |
isBlackBeltMode() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
getOptionValues(String) |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
getExtraQualifiers() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
getExtraGffQualifiers() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
getFont() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
getOptions() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |
getArtemisEntryInformation() |  | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |