Bases

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethods
Total649 of 2,30071%80 of 26469%66191119491448
contigRearrange(Feature, int)1770%100%66313111
getStopCodons(Range, int)13714851%251537%1721276001
getSubSequence(Range, int)704840%8850%69122601
setCache(int, int, char[], int, StringVector, byte[], int, int)4711671%31178%3842001
getMatchingCodons(Range, int, StringVector)4014378%71973%71484201
getSubSequenceC(Range, int)388268%41275%3972801
getStopOrStartCodons(Range, int, StringVector)2626691%73583%72265701
isCodon(char, char, char, StringVector)260%20%224411
getStartCodonCache()190%20%224411
reverseComplement(Feature)138486%2250%2322101
deleteRange(Range)135681%n/a0121501
reverseComplement()133673%n/a0121301
complementRange(Range)131858%n/a012601
clearCodonCache()70%n/a113311
addSequenceChangeListener(SequenceChangeListener, int)41780%2250%232601
complement(char)3494%11694%11711801
isStopCodon(char, char, char)2793%3975%371601
getIndexOfBase(char)1083%1480%151601
isMatchingCodon(String, int, int, String)68100%21285%2801601
addBases(int, int, String)59100%2100%0201301
Bases(Sequence)49100%2100%0201101
getBaseAt(int)41100%4100%030501
fireSequenceChangeEvent(SequenceChangeEvent)33100%1583%1401001
reverseComplement(char[])26100%2100%020701
reverseComplement(String)25100%2100%020401
removeSequenceChangeListener(SequenceChangeListener)24100%4100%030601
complement(String)24100%2100%020401
static {...}24100%n/a010101
isMatchingCodon(String, int, int, StringVector)22100%4100%030701
complement(char[])21100%2100%020401
getStopCodonCache()19100%2100%020401
getAverageGCPercent()16100%n/a010301
getAverageAGPercent()16100%n/a010301
truncate(Range)15100%n/a010301
isLegalBase(char)14100%6100%060701
getRawPosition(int, int)9100%2100%020301
getTranslation(Range, int, boolean)9100%n/a010201
getSpacedTranslation(Range, int, boolean)9100%n/a010201
toString()7100%n/a010101
getComplementPosition(int)7100%n/a010101
getLength()4100%n/a010101
getACount()4100%n/a010101
getTCount()4100%n/a010101
getGCount()4100%n/a010101
getCCount()4100%n/a010101
getForwardStrand()3100%n/a010101
getReverseStrand()3100%n/a010101
getSequence()3100%n/a010101