GeneUtils

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethods
Total1,949 of 2,85231%275 of 39229%1832384817122142
addLazyQualifiers(GFFStreamFeature)3130%380%2020757511
lazyLoadAll(Entry, JFrame)2030%400%2121444411
defineShowHideGeneFeatures(FeatureVector)1840%100%66383811
propagateId(GFFStreamFeature, String, Set)1590%160%99434311
createGeneModel(JFrame, Selection, EntryGroup, GotoEventSource)1540%60%44505011
convertPseudo(ChadoCanonicalGene)1430%140%88292911
addSegment(GFFStreamFeature, RangeVector, String)1170%100%66242411
promptForUniquename(EntryGroup, boolean, Range)860%120%77191911
promptForUniquename(EntryGroup, boolean)760%140%88181811
fixParentQualifier(String, String, Set)640%100%66141411
deriveResidues(GFFStreamFeature)600%80%55191911
getFeatureForUpdatingResidues(GFFStreamFeature)600%60%44171711
complementGeneModel(ChadoCanonicalGene)560%60%44191911
sort(Vector)510%80%55101011
showHideGeneFeatures(FeatureVector)460%100%66121211
duplicateGeneModel(JFrame, FeatureVector, EntryGroup)3217084%51168%5944301
isUniqueID(EntryGroup, String)320%40%337711
isBoundaryOK(ChadoCanonicalGene)2119690%254162%213445901
setLocation(Feature, int, int, boolean)143068%1150%1271501
checkTranscriptBoundary(Feature, ChadoCanonicalGene, boolean)96487%3975%3732001
checkProteinBoundary(Feature, ChadoCanonicalGene, boolean)88391%81055%81032601
deleteAllFeature(Feature, ChadoCanonicalGene, boolean)82676%2466%2421101
isDatabaseEntry(Feature)8642%3125%232401
isFeatureToUpdateResidues(String)80%20%223311
getUniqueName(Feature)5861%n/a013401
deleteAllFeature(Feature, ChadoCanonicalGene)50%n/a112211
checkTranscriptBoundary(Feature, ChadoCanonicalGene)50%n/a111111
main(String[])50%n/a112211
isStrandOK(ChadoCanonicalGene)46594%21083%2721801
checkGeneBoundary(ChadoCanonicalGene, boolean)45493%7750%6811501
GeneUtils()30%n/a111111
duplicateFeature(Feature, ChadoCanonicalGene)2592%1375%131801
isDatabaseEntry(EntryGroup)1990%1375%131501
isObsolete(GFFStreamFeature)1890%1375%131601
static {...}54100%n/a010801
duplicateFeatures(List, ChadoCanonicalGene)27100%4100%030701
isGFFEntry(EntryGroup)21100%4100%030501
isNonCodingTranscripts(Key)19100%4100%030401
deleteFeature(Feature)8100%2250%230301
isHiddenFeature(String)4100%n/a010101
checkGeneBoundary(ChadoCanonicalGene)4100%n/a010201
getNonCodingTranscripts()100%n/a010101