Feature

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethods
Total1,300 of 4,31769%209 of 53460%1703843441,15213117
fixTranslationExceptions()1331811%2029%1112344201
sequenceChanged(SequenceChangeEvent)12111749%191950%1120276201
trimStart(boolean, boolean)1124629%12425%89364901
fixStopCodon()965134%4233%34254101
findOrReplaceText(String, boolean, boolean, boolean, StringVector, String)8914461%193564%1428287601
getColour()686548%14836%812214001
hasRequiredQualifiers()460%60%44121211
moveSegments(int)420%20%229911
moveTo(Entry, boolean)370%20%22131311
getWriteRange()363347%3350%3441001
isPartial(boolean)331226%1516%89111501
duplicate(boolean)323048%1375%1351101
getTranslation()273657%41071%4861601
copyTo(Entry)240%20%227711
hasValidStartCodon(boolean)213965%5964%4851701
writeNative(Writer)211134%1150%125801
getUpstreamBases(int)202757%2250%2341301
getPositionInSequence(int)194067%2466%242901
hasValidStopCodon(boolean)173969%8642%6851601
getDownstreamBases(int)173567%2250%2341401
removeSegment(FeatureSegment)173063%1150%1231401
getScore()162358%6100%0441301
set(Date, Key, Location, QualifierVector)147684%41275%4921901
updateEMBLFeatureLocation()143973%2100%0231201
addSegment(Range, QualifierVector)131959%n/a012901
isPartialCDS()131350%1375%132501
toString()131145%n/a012601
reverseComplement(int)131043%n/a012701
set(Key, Location, QualifierVector)13940%n/a012501
getMaxRawRange()13838%n/a012301
reexamineSegments()1115593%22090%21244701
markerChanged(MarkerChangeEvent)110%n/a115511
getDatestamp()110%20%223311
rawLessThan(Feature)90%20%223311
rawGreaterThan(Feature)90%20%223311
getCodonStart()71872%2466%2441001
writePIROfFeature(Writer)66391%2250%2321801
toReader()60%n/a111111
pickName(StringVector)55191%7956%7911301
stopListening()53386%4450%4511001
fireAction(Vector, ChangeEvent)53286%2100%020801
writeAminoAcidsOfFeature(Writer)46994%1150%1211801
getValueOfQualifier(String)42083%2466%242901
getIDString()4969%1150%121501
hasValidStopCodon()40%n/a111111
duplicate()40%n/a111111
setEmblFeature(Feature)40%n/a112211
removeQualifierByName(String)33491%1375%131901
setQualifier(Qualifier)32990%1150%121701
getProductString()32086%2466%242801
getFirstCodingBaseMarker()31076%n/a012401
getSystematicName()3975%1150%121501
getLabel()3457%n/a012301
getGeneName()3457%n/a012301
getNote()3457%n/a012301
getPercentGC()24795%1787%1511101
getRawLastBase()24395%2675%2511401
getRawFirstBase()24195%1787%1511301
hasValidEMBLKey()2981%1150%121301
getFirstBase()2880%1150%121401
getLastBase()2880%1150%121401
lessThan(Feature)2777%1150%121301
greaterThan(Feature)2777%1150%121301
entryChanged(EntryChangeEvent)0%n/a111111
setArrays()217100%72175%71504101
get12CorrelationScore()164100%n/a0102301
Feature(Feature)56100%n/a0101801
getAllQualifierNames(FeatureVector)51100%6100%0401401
getTranslationBasesLength()47100%1375%1301301
getFeaturePositionFromMarker(Marker)46100%1583%1401201
createSegments()37100%2100%0201001
getLastBaseMarker()36100%1375%1301001
getBases()33100%4100%030701
getFirstBaseMarker()33100%4100%0301001
setEntry(Entry)32100%10100%0601301
startListening()32100%3350%340901
getBaseCount()31100%4100%030701
getSegments()31100%1583%140901
isProteinFeature()30100%2880%260701
wrapAndWrite(PrintWriter, String, int)28100%4100%0301001
addQualifierValues(Qualifier)28100%2100%020901
resetCache()27100%n/a010901
startSegmentsListening()26100%4100%030601
stopSegmentsListening()24100%4100%030501
writeBasesOfFeature(Writer)22100%n/a010601
locationChanged(Location, QualifierVector, int)22100%n/a010501
setLocationInternal(Location)19100%1150%120601
getTranslationBases()18100%n/a010401
getCodonCount(int, int, int)14100%1150%120301
getAACount()13100%1150%120301
getStrand()13100%2100%020301
getPositionalBaseCount(int, int)12100%2100%020301
getValuesOfQualifier(String)11100%2100%020401
getResidueCount(int)10100%2100%020301
getBaseCount(int)10100%2100%020301
setLocation(Location)10100%n/a010401
getSequenceLength()10100%n/a010201
isCDS()9100%2100%020301
containsText(String, boolean, boolean, StringVector)9100%n/a010101
addSegment(Range)9100%n/a010301
isForwardFeature()8100%2100%020301
getLocation()6100%n/a010201
locationChanged(Location)6100%n/a010201
removeFeatureChangeListener(FeatureChangeListener)6100%n/a010201
makeSegment(Range)6100%n/a010101
optionChanged(OptionChangeEvent)5100%n/a010201
getQualifierByName(String)5100%n/a010101
removeFromEntry()5100%n/a010201
addFeatureChangeListener(FeatureChangeListener)5100%n/a010201
getKey()4100%n/a010101
getQualifiers()4100%n/a010101
hasValidStartCodon()4100%n/a010101
getMolecularWeight()4100%n/a010101
resetColour()4100%n/a010201
isReadOnly()4100%n/a010101
getEmblFeature()3100%n/a010101
getEntry()3100%n/a010101