drawLinePlot(Graphics2D, int, int, LineAttributes, int[][]) |  | 0% |  | 0% | 13 | 13 | 52 | 52 | 1 | 1 |
defineOpts() |  | 0% |  | 0% | 9 | 9 | 72 | 72 | 1 | 1 |
drawHeatMap(Graphics2D, int, LineAttributes, int, int[][], String, boolean) |  | 0% |  | 0% | 7 | 7 | 27 | 27 | 1 | 1 |
addRecord(SAMRecord, int, String, boolean) |  | 0% |  | 0% | 14 | 14 | 27 | 27 | 1 | 1 |
draw(Graphics2D, int, int, List) |  | 0% |  | 0% | 8 | 8 | 23 | 23 | 1 | 1 |
init() |  | 0% |  | 0% | 6 | 6 | 17 | 17 | 1 | 1 |
drawPlot(Graphics2D) |  | 0% |  | 0% | 7 | 7 | 15 | 15 | 1 | 1 |
singleClick(boolean, int) |  | 0% |  | 0% | 8 | 8 | 15 | 15 | 1 | 1 |
paintComponent(Graphics) |  | 0% |  | 0% | 3 | 3 | 9 | 9 | 1 | 1 |
getLineAttributes(int) |  | 0% |  | 0% | 4 | 4 | 8 | 8 | 1 | 1 |
getToolTipText(int) |  | 0% |  | 0% | 5 | 5 | 7 | 7 | 1 | 1 |
useMaxCutOff() |  | 0% |  | 0% | 5 | 5 | 2 | 2 | 1 | 1 |
addSeparator(GridBagConstraints, JPanel) |  | 0% | | n/a | 1 | 1 | 8 | 8 | 1 | 1 |
adjustIdx(int, List) |  | 0% |  | 0% | 3 | 3 | 5 | 5 | 1 | 1 |
isNegativeStrand(SAMRecord, boolean) |  | 0% |  | 0% | 4 | 4 | 6 | 6 | 1 | 1 |
getMaxCoverage() |  | 0% |  | 0% | 2 | 2 | 1 | 1 | 1 | 1 |
init(BamView, float, int, int) |  | 0% | | n/a | 1 | 1 | 5 | 5 | 1 | 1 |
isRedraw() |  | 0% |  | 0% | 2 | 2 | 4 | 4 | 1 | 1 |
hasSelectedBams() |  | 0% |  | 0% | 2 | 2 | 1 | 1 | 1 | 1 |
showLabels(boolean) |  | 0% | | n/a | 1 | 1 | 3 | 3 | 1 | 1 |
makeComposite(float) |  | 0% | | n/a | 1 | 1 | 2 | 2 | 1 | 1 |
setPlotByStrand(boolean) |  | 0% | | n/a | 1 | 1 | 3 | 3 | 1 | 1 |
setPlotHeatMap(boolean) |  | 0% | | n/a | 1 | 1 | 2 | 2 | 1 | 1 |
isPlotHeatMap() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
getSelected() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
CoveragePanel() |  | 100% | | n/a | 0 | 1 | 0 | 12 | 0 | 1 |
createMenus(JComponent) |  | 100% | | n/a | 0 | 1 | 0 | 7 | 0 | 1 |
CoveragePanel(BamView) |  | 100% | | n/a | 0 | 1 | 0 | 6 | 0 | 1 |
static {...} | | 100% | | n/a | 0 | 1 | 0 | 1 | 0 | 1 |