VCFview

ElementMissed InstructionsCov.Missed BranchesCov.MissedCxtyMissedLinesMissedMethods
Total2,772 of 4,10532%361 of 41011%2282595148023354
showLabels(Graphics2D)2100%260%1414393911
drawVariantCall(Graphics2D, VCFRecord, int, int, int, int, float, FeatureVector, AbstractVCFReader, int)2050%240%1313303011
main(String[])1830%280%1515404011
paintComponent(Graphics)1750%260%1414363611
getToolTipText()16153%9110%56182001
findVariantAtPoint(Point)1450%200%1111272711
drawRegion(Graphics2D, String, int, int, int, int, int, float, FeatureVector)1430%100%66171711
drawScale(Graphics2D, int, int, float, int)1280%160%99212111
searchRegion(String, int, int, int, int, Point, FeatureVector, int, float)1230%140%88191911
drawTicks(Graphics2D, int, int, float, int, int)1130%100%66181811
getSequenceOffset(String)10454%1118%67161801
highlightRange(MouseEvent, int)910%140%88212111
isMouseOver(Point, VCFRecord, FeatureVector, int, int, int, int, float, AbstractVCFReader)890%140%88151511
download(String, String)720%40%33181811
readHeader(String, int)5211368%61062%5983001
drawSelectionRange(Graphics2D, float, int, int)520%80%55121211
getCDSFeaturesInRange(int, int)510%60%44141411
isOverlappingFeature(FeatureVector, int)490%120%779911
isOverlappingFeature(List, int)460%120%778811
getColourForSNP(VCFRecord, FeatureVector, int)450%120%77111111
setGraphSize()420%20%228811
setAsStop(VCFRecord, FeatureVector, int, AbstractVCFReader)410%140%88101011
setZoomLevel(int)400%20%229911
getQualityColour(VCFRecord)380%60%448811
getYPostion(int)380%80%557711
getVcfContainer()370%80%556611
createTopPanel(JFrame, EntryEdit)3619084%5758%5764601
VCFview(JFrame, JPanel, List, int, int, String, String, EntryEdit, FeatureDisplay)3328189%5758%5777201
getReference(String)334155%3350%3472201
getVariantColour(String)270%80%559911
createMenus()2545694%2880%2659401
getScreenPosition(int, float, int, int)210%n/a114411
setDisplay()204971%1375%1311001
handleCanvasMouseDrag(MouseEvent)200%40%338811
getImageIcon(Color)171037%1150%124701
testForURL(String, boolean)121045%2250%231301
makeColours(Color, int)117787%3562%3531701
getBaseAtStartOfView()110%20%223311
displayAdjustmentValueChanged(DisplayAdjustmentEvent)100%n/a114411
repaint()7646%3125%231401
makeComposite(float)0%n/a111111
getSelection()0%n/a111111
getBasesInView()0%n/a111111
getCombo()0%n/a111111
selectionChanged(SelectionChangeEvent)0%n/a112211
addToViewMenu(int)33100%n/a010701
static {...}17100%n/a010801
showVariant(VCFRecord, FeatureVector, int, AbstractVCFReader, int, int)10100%n/a010101
getLabel(int)9100%n/a010101
getPixPerBaseByWidth()9100%n/a010101
getEntryGroup()100%n/a010101
getChr()100%n/a010101
isConcatenate()100%n/a010101
getVcfReaders()100%n/a010101