Summary

Test suite

Test case 1

  1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
  2: boolean boolean0 = cRAMReferenceSequenceFile0.isReferenceIndexed();
  3: assertFalse(boolean0);

Test case 2

  1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
  2: ReferenceSequence referenceSequence0 = cRAMReferenceSequenceFile0.nextSequence();
  3: assertNull(referenceSequence0);

Test case 3

  1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
  2: SAMSequenceDictionary sAMSequenceDictionary0 = cRAMReferenceSequenceFile0.getSequenceDictionary();
  3: assertNull(sAMSequenceDictionary0);

Test case 4

  1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
  2: boolean boolean0 = cRAMReferenceSequenceFile0.isIndexed();
  3: assertTrue(boolean0);

Test case 5

  1: SimpleEntryGroup simpleEntryGroup0 = new SimpleEntryGroup();
  2: Entry entry0 = simpleEntryGroup0.createEntry("");
  3: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile(entry0, (BamView) null);
  4: cRAMReferenceSequenceFile0.reset();

Test case 6

  1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
  2: cRAMReferenceSequenceFile0.getSubsequenceAt("", (-128L), 4294967295L);

Test case 7

  1: FastaStreamSequence fastaStreamSequence0 = new FastaStreamSequence("4O1rFYpRMn'@u>\"e4");
  2: Bases bases0 = new Bases(fastaStreamSequence0);
  3: SimpleEntryGroup simpleEntryGroup0 = new SimpleEntryGroup(bases0);
  4: Entry entry0 = simpleEntryGroup0.createEntry("");
  5: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile(entry0, (BamView) null);
  6: cRAMReferenceSequenceFile0.getSequence("4O1rFYpRMn'@u>\"e4");

Source Code

  1: No source found for uk.ac.sanger.artemis.components.alignment.CRAMReferenceSequenceFile

EvoSuite Parameters

  • TARGET_CLASS: uk.ac.sanger.artemis.components.alignment.CRAMReferenceSequenceFile
  • Size: 7
  • Length: 20
  • criterion: LINE;BRANCH;EXCEPTION;WEAKMUTATION;OUTPUT;METHOD;METHODNOEXCEPTION;CBRANCH
  • Coverage: 0.5962988624278946
  • BranchCoverage: 0.7272727272727273
  • MethodCoverage: 0.8888888888888888
  • OutputCoverage: 0.12903225806451613


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