createIntronFeatures(JFrame, Selection, EntryGroup) |  | 0% |  | 0% | 18 | 18 | 69 | 69 | 1 | 1 |
createIntergenicFeatures(JFrame, EntryGroup) |  | 0% |  | 0% | 21 | 21 | 80 | 80 | 1 | 1 |
markAmbiguities() |  | 0% |  | 0% | 11 | 11 | 42 | 42 | 1 | 1 |
createFeatureFromBaseRange(JFrame, Selection, EntryGroup, GotoEventSource) |  | 0% |  | 0% | 8 | 8 | 51 | 51 | 1 | 1 |
markOpenReadingFrames(int, boolean, boolean, JFrame) |  | 0% |  | 0% | 5 | 5 | 41 | 41 | 1 | 1 |
makeFeaturesFromPattern(BasePattern) |  | 0% |  | 0% | 7 | 7 | 36 | 36 | 1 | 1 |
createFeatures(Vector, JFrame, String) |  | 0% |  | 0% | 3 | 3 | 36 | 36 | 1 | 1 |
createGeneFeatures(JFrame, Selection, EntryGroup) |  | 0% |  | 0% | 6 | 6 | 41 | 41 | 1 | 1 |
createExonFeatures(JFrame, Selection, EntryGroup) |  | 0% |  | 0% | 5 | 5 | 34 | 34 | 1 | 1 |
makeNewFeature() |  | 0% |  | 0% | 4 | 4 | 24 | 24 | 1 | 1 |
markOpenReadingFrames(Entry, MarkerRange, int, boolean, int, int) |  | 0% |  | 0% | 6 | 6 | 28 | 28 | 1 | 1 |
union(Vector, Vector) |  | 0% |  | 0% | 11 | 11 | 19 | 19 | 1 | 1 |
makeFeatureFromMarkerRange(Entry, MarkerRange, Key, QualifierVector) |  | 0% |  | 0% | 5 | 5 | 23 | 23 | 1 | 1 |
markORFSWithSize(boolean, JFrame) |  | 0% |  | 0% | 3 | 3 | 21 | 21 | 1 | 1 |
overlapsAnActiveSegment(Feature) |  | 0% |  | 0% | 7 | 7 | 25 | 25 | 1 | 1 |
AddMenu(JFrame, Selection, EntryGroup, GotoEventSource, BasePlotGroup, AlignmentViewer, AlignmentViewer, String) |   | 89% |   | 50% | 7 | 8 | 7 | 62 | 0 | 1 |
markOpenReadingFramesInRange() |  | 0% |  | 0% | 2 | 2 | 8 | 8 | 1 | 1 |
makeFeaturesFromPattern() |  | 0% | | n/a | 1 | 1 | 4 | 4 | 1 | 1 |
makeNewEntry() |  | 0% | | n/a | 1 | 1 | 2 | 2 | 1 | 1 |
getTotalRange(Feature) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
getGotoEventSource() |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
AddMenu(JFrame, Selection, EntryGroup, GotoEventSource, BasePlotGroup, String) |  | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |
static {...} |  | 100% | | n/a | 0 | 1 | 0 | 4 | 0 | 1 |
AddMenu(JFrame, Selection, EntryGroup, GotoEventSource, BasePlotGroup) |  | 100% | | n/a | 0 | 1 | 0 | 2 | 0 | 1 |