Summary

Test suite

Test case 1

  1: MockFile mockFile0 = new MockFile("");
  2: FileSystemHandling.shouldAllThrowIOExceptions();
  3: FastaStreamSequence fastaStreamSequence0 = new FastaStreamSequence("s|");
  4: Bases bases0 = new Bases(fastaStreamSequence0);
  5: Strand strand0 = bases0.getForwardStrand();
  6: CodonUsageWeight codonUsageWeight0 = new CodonUsageWeight(mockFile0, strand0);
  7: codonUsageWeight0.getName();

Test case 2

  1: MockFile mockFile0 = new MockFile("");
  2: FileSystemHandling.shouldAllThrowIOExceptions();
  3: FastaStreamSequence fastaStreamSequence0 = new FastaStreamSequence("(", "s|");
  4: Bases bases0 = new Bases(fastaStreamSequence0);
  5: Strand strand0 = bases0.getForwardStrand();
  6: CodonUsageWeight codonUsageWeight0 = new CodonUsageWeight(mockFile0, strand0);
  7: float float0 = codonUsageWeight0.getCodonValue('i', 'i', 'y');
  8: assertEquals(1.0F, float0, 0.01F);

Test case 3

  1: MockFile mockFile0 = new MockFile("DBXREF: ID=");
  2: FastaStreamSequence fastaStreamSequence0 = new FastaStreamSequence("DBXREF: ID=", "DBXREF: ID=");
  3: Bases bases0 = new Bases(fastaStreamSequence0);
  4: Strand strand0 = bases0.getForwardStrand();
  5: MockFileWriter mockFileWriter0 = new MockFileWriter("DBXREF: ID=", false);
  6: CodonUsageWeight codonUsageWeight0 = new CodonUsageWeight(mockFile0, strand0);
  7: assertEquals("DBXREF: ID=", codonUsageWeight0.getName());

Test case 4

  1: FastaStreamSequence fastaStreamSequence0 = new FastaStreamSequence("");
  2: Bases bases0 = new Bases(fastaStreamSequence0);
  3: Strand strand0 = bases0.getReverseStrand();
  4: CodonUsageWeight codonUsageWeight0 = new CodonUsageWeight((File) null, strand0);

Test case 5

  1: CodonUsageWeight codonUsageWeight0 = new CodonUsageWeight((File) null, (Strand) null);

Test case 6

  1: MockFile mockFile0 = new MockFile("");
  2: FileSystemHandling.shouldAllThrowIOExceptions();
  3: FastaStreamSequence fastaStreamSequence0 = new FastaStreamSequence("s|");
  4: Bases bases0 = new Bases(fastaStreamSequence0);
  5: Strand strand0 = bases0.getForwardStrand();
  6: CodonUsageWeight codonUsageWeight0 = new CodonUsageWeight(mockFile0, strand0);
  7: float float0 = codonUsageWeight0.getCodonValue('~', ',', '~');
  8: assertEquals(1.0F, float0, 0.01F);

Test case 7

  1: MockFile mockFile0 = new MockFile("org.biojava.bio.symbol.CompoundLocation", "org.biojava.bio.symbol.CompoundLocation");
  2: FastaStreamSequence fastaStreamSequence0 = new FastaStreamSequence("org.biojava.bio.symbol.CompoundLocation", "org.biojava.bio.symbol.CompoundLocation");
  3: EmblStreamSequence emblStreamSequence0 = new EmblStreamSequence(fastaStreamSequence0);
  4: Bases bases0 = new Bases(emblStreamSequence0);
  5: Strand strand0 = bases0.getReverseStrand();
  6: CodonUsageWeight codonUsageWeight0 = new CodonUsageWeight(mockFile0, strand0);

Source Code

  1: No source found for uk.ac.sanger.artemis.plot.CodonUsageWeight

EvoSuite Parameters

  • TARGET_CLASS: uk.ac.sanger.artemis.plot.CodonUsageWeight
  • Size: 7
  • Length: 38
  • criterion: LINE;BRANCH;EXCEPTION;WEAKMUTATION;OUTPUT;METHOD;METHODNOEXCEPTION;CBRANCH
  • Coverage: 0.6715236258261164
  • BranchCoverage: 0.525
  • MethodCoverage: 1.0
  • OutputCoverage: 0.3333333333333333


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