Test suite
Test case 1
1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
2: boolean boolean0 = cRAMReferenceSequenceFile0.isReferenceIndexed();
3: assertFalse(boolean0);
Test case 2
1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
2: ReferenceSequence referenceSequence0 = cRAMReferenceSequenceFile0.nextSequence();
3: assertNull(referenceSequence0);
Test case 3
1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
2: SAMSequenceDictionary sAMSequenceDictionary0 = cRAMReferenceSequenceFile0.getSequenceDictionary();
3: assertNull(sAMSequenceDictionary0);
Test case 4
1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
2: boolean boolean0 = cRAMReferenceSequenceFile0.isIndexed();
3: assertTrue(boolean0);
Test case 5
1: SimpleEntryGroup simpleEntryGroup0 = new SimpleEntryGroup();
2: Entry entry0 = simpleEntryGroup0.createEntry("");
3: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile(entry0, (BamView) null);
4: cRAMReferenceSequenceFile0.reset();
Test case 6
1: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile((Entry) null, (BamView) null);
2: cRAMReferenceSequenceFile0.getSubsequenceAt("", (-128L), 4294967295L);
Test case 7
1: FastaStreamSequence fastaStreamSequence0 = new FastaStreamSequence("4O1rFYpRMn'@u>\"e4");
2: Bases bases0 = new Bases(fastaStreamSequence0);
3: SimpleEntryGroup simpleEntryGroup0 = new SimpleEntryGroup(bases0);
4: Entry entry0 = simpleEntryGroup0.createEntry("");
5: CRAMReferenceSequenceFile cRAMReferenceSequenceFile0 = new CRAMReferenceSequenceFile(entry0, (BamView) null);
6: cRAMReferenceSequenceFile0.getSequence("4O1rFYpRMn'@u>\"e4");
Source Code
1: No source found for uk.ac.sanger.artemis.components.alignment.CRAMReferenceSequenceFile
EvoSuite Parameters
- TARGET_CLASS: uk.ac.sanger.artemis.components.alignment.CRAMReferenceSequenceFile
- Size: 7
- Length: 20
- criterion: LINE;BRANCH;EXCEPTION;WEAKMUTATION;OUTPUT;METHOD;METHODNOEXCEPTION;CBRANCH
- Coverage: 0.5962988624278946
- BranchCoverage: 0.7272727272727273
- MethodCoverage: 0.8888888888888888
- OutputCoverage: 0.12903225806451613
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