handleReservedTags(GFFStreamFeature, String, Qualifier, Qualifier) |  | 0% |  | 0% | 32 | 32 | 102 | 102 | 1 | 1 |
editKeyAndQualifiers(QualifierVector, QualifierVector, Key, Key, GFFStreamFeature, int) |  | 0% |  | 0% | 34 | 34 | 104 | 104 | 1 | 1 |
addReservedTag(String, String, String, GFFStreamFeature, StringVector, StringVector, boolean) |  | 0% |  | 0% | 22 | 22 | 82 | 82 | 1 | 1 |
featureChanged(FeatureChangeEvent) |  | 0% |  | 0% | 30 | 30 | 94 | 94 | 1 | 1 |
updateFeature(GFFStreamFeature, String, Qualifier, Qualifier) |  | 0% |  | 0% | 26 | 26 | 81 | 81 | 1 | 1 |
getFeatureCvTerm(String, String, String, GFFStreamFeature) |  | 0% |  | 0% | 28 | 28 | 84 | 84 | 1 | 1 |
insertFeature(Feature) |  | 0% |  | 0% | 17 | 17 | 84 | 84 | 1 | 1 |
insertFeatureSegment(FeatureSegment, String) |  | 0% |  | 0% | 15 | 15 | 66 | 66 | 1 | 1 |
loadDbXRefsAndPubs(String, FeatureCvTerm) |  | 0% |  | 0% | 11 | 11 | 45 | 45 | 1 | 1 |
entryChanged(EntryChangeEvent) |  | 0% |  | 0% | 14 | 14 | 52 | 52 | 1 | 1 |
getFeatureLoc(GFFStreamFeature, String, Range) |  | 0% |  | 0% | 13 | 13 | 43 | 43 | 1 | 1 |
updateHistory(GFFStreamFeature, String) |  | 0% |  | 0% | 9 | 9 | 37 | 37 | 1 | 1 |
processFeatureProp(GFFStreamFeature, String, String, int, int, String, Integer) |  | 0% |  | 0% | 5 | 5 | 23 | 23 | 1 | 1 |
deleteFeature(String, String, GFFStreamFeature) |  | 0% |  | 0% | 10 | 10 | 32 | 32 | 1 | 1 |
segmentNumberChanged(GFFStreamFeature, RangeVector, RangeVector) |  | 0% |  | 0% | 8 | 8 | 32 | 32 | 1 | 1 |
processFeatureRelationshipRank(GFFStreamFeature, RangeVector, int) |  | 0% |  | 0% | 5 | 5 | 30 | 30 | 1 | 1 |
sequenceChanged(SequenceChangeEvent) |  | 0% |  | 0% | 4 | 4 | 25 | 25 | 1 | 1 |
addQualifiers(QualifierVector, Feature, GFFStreamFeature, String) |  | 0% |  | 0% | 10 | 10 | 28 | 28 | 1 | 1 |
deleteFeatureRelationShip(String, String, String, GFFStreamFeature) |  | 0% | | n/a | 1 | 1 | 23 | 23 | 1 | 1 |
static {...} |  | 0% | | n/a | 1 | 1 | 13 | 13 | 1 | 1 |
updateFeatureLoc(GFFStreamFeature, String) |  | 0% |  | 0% | 3 | 3 | 22 | 22 | 1 | 1 |
deletePolypetideDomains(GFFStreamFeature, Feature) |  | 0% |  | 0% | 7 | 7 | 22 | 22 | 1 | 1 |
deleteSimilarity(String, GFFStreamFeature) |  | 0% |  | 0% | 3 | 3 | 19 | 19 | 1 | 1 |
commit(DatabaseDocument, boolean, ChadoTransactionManager) |  | 0% |  | 0% | 9 | 9 | 20 | 20 | 1 | 1 |
initCV() |  | 0% |  | 0% | 3 | 3 | 9 | 9 | 1 | 1 |
getFeatureDbXRef(String, String) |  | 0% |  | 0% | 2 | 2 | 17 | 17 | 1 | 1 |
getFeatureSynonym(String, String, String) |  | 0% |  | 0% | 3 | 3 | 19 | 19 | 1 | 1 |
getCvTerm(String, String) |  | 0% |  | 0% | 4 | 4 | 12 | 12 | 1 | 1 |
isSynonymTag(String, GFFStreamFeature) |  | 0% |  | 0% | 7 | 7 | 16 | 16 | 1 | 1 |
isRemovingDuplicateQualifiers(int, StringVector, StringVector, String) |  | 0% |  | 0% | 7 | 7 | 13 | 13 | 1 | 1 |
getCvTerm(String, String, String, String) |  | 0% |  | 0% | 3 | 3 | 14 | 14 | 1 | 1 |
createCvTerm(String, String, String) |  | 0% | | n/a | 1 | 1 | 5 | 5 | 1 | 1 |
getFeatureInsertUpdate() |  | 0% |  | 0% | 6 | 6 | 12 | 12 | 1 | 1 |
getFeatureProp(String, String, Integer, int) |  | 0% | | n/a | 1 | 1 | 10 | 10 | 1 | 1 |
updateResidueColumn(ChadoTransaction) |  | 0% |  | 0% | 3 | 3 | 8 | 8 | 1 | 1 |
synchColourInGeneModel(GFFStreamFeature, String, Qualifier) |  | 0% | | n/a | 1 | 1 | 10 | 10 | 1 | 1 |
getFeaturePub(String, String) |  | 0% | | n/a | 1 | 1 | 8 | 8 | 1 | 1 |
getSql() |  | 0% |  | 0% | 2 | 2 | 4 | 4 | 1 | 1 |
stripQuotes(String) |  | 0% |  | 0% | 4 | 4 | 5 | 5 | 1 | 1 |
getFeatureCvTermPropRank(List, String) |  | 0% |  | 0% | 3 | 3 | 6 | 6 | 1 | 1 |
isReservedTag(String) |  | 0% |  | 0% | 3 | 3 | 4 | 4 | 1 | 1 |
isCvTag(String) |  | 0% |  | 0% | 3 | 3 | 4 | 4 | 1 | 1 |
isSpecialTag(String) |  | 0% |  | 0% | 4 | 4 | 3 | 3 | 1 | 1 |
addHistory(ChadoTransaction, String, String) |  | 0% |  | 0% | 2 | 2 | 4 | 4 | 1 | 1 |
logMDC() |  | 0% | | n/a | 1 | 1 | 4 | 4 | 1 | 1 |
ChadoTransactionManager() |  | 0% | | n/a | 1 | 1 | 3 | 3 | 1 | 1 |
hasTransactions() |  | 0% |  | 0% | 2 | 2 | 3 | 3 | 1 | 1 |
getTransactionAt(int) |  | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
setEntryGroup(EntryGroup) | | 0% | | n/a | 1 | 1 | 2 | 2 | 1 | 1 |
getTransactionCount() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
setSql(Vector) | | 0% | | n/a | 1 | 1 | 2 | 2 | 1 | 1 |
getSynonymTags() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |
getCommitReturnValue() | | 0% | | n/a | 1 | 1 | 1 | 1 | 1 | 1 |