Summary

Test suite

Test case 1

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: ChadoCanonicalGene.RangeComparator chadoCanonicalGene_RangeComparator0 = chadoCanonicalGene0.new RangeComparator();
  3: Range range0 = new Range(0);
  4: int int0 = chadoCanonicalGene_RangeComparator0.compare(range0, range0);
  5: assertEquals(0, int0);

Test case 2

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.setGene((Feature) null);
  3: assertEquals(0, chadoCanonicalGene0.getSrcfeature_id());

Test case 3

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: Hashtable<String, List<Feature>> hashtable0 = (Hashtable<String, List<Feature>>)chadoCanonicalGene0.getSplicedFeatures();
  3: assertTrue(hashtable0.isEmpty());

Test case 4

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: int int0 = chadoCanonicalGene0.getSeqlen();
  3: assertEquals(0, int0);

Test case 5

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.setSeqlen(3);
  3: assertEquals(3, chadoCanonicalGene0.getSeqlen());

Test case 6

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: Key key0 = new Key("7Wah");
  3: QualifierVector qualifierVector0 = new QualifierVector();
  4: BlastStreamFeature blastStreamFeature0 = new BlastStreamFeature(key0, (Location) null, qualifierVector0);
  5: chadoCanonicalGene0.addProtein("6e9XuxF", blastStreamFeature0);
  6: assertEquals(0, chadoCanonicalGene0.getSrcfeature_id());

Test case 7

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: List<Feature> list0 = chadoCanonicalGene0.getTranscripts();
  3: assertTrue(list0.isEmpty());

Test case 8

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: int int0 = chadoCanonicalGene0.getSrcfeature_id();
  3: assertEquals(0, int0);

Test case 9

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: Feature feature0 = chadoCanonicalGene0.getGene();
  3: assertNull(feature0);

Test case 10

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.getGeneUniqueName();

Test case 11

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.addTranscript((Feature) null);
  3: assertEquals(0, chadoCanonicalGene0.getSrcfeature_id());

Test case 12

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.setSrcfeature_id(140);
  3: assertEquals(140, chadoCanonicalGene0.getSrcfeature_id());

Test case 13

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: EmblStreamFeature emblStreamFeature0 = new EmblStreamFeature();
  3: GenbankStreamFeature genbankStreamFeature0 = new GenbankStreamFeature(emblStreamFeature0);
  4: chadoCanonicalGene0.deleteFeature(genbankStreamFeature0);
  5: assertEquals(0, chadoCanonicalGene0.getSeqlen());

Test case 14

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.updateUniqueName("", "G6yr", (Set<Feature>) null);
  3: assertEquals(0, chadoCanonicalGene0.getSrcfeature_id());

Test case 15

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.addSplicedFeatures("", (Feature) null, false);
  3: assertEquals(0, chadoCanonicalGene0.getSeqlen());

Test case 16

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.addSplicedFeatures("", (Feature) null, true);
  3: chadoCanonicalGene0.getTranscriptFromName("p)");

Test case 17

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.correctSpliceSiteAssignments();
  3: assertEquals(0, chadoCanonicalGene0.getSeqlen());

Test case 18

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.add3PrimeUtr("XE~XM(um-9!`", (Feature) null);
  3: chadoCanonicalGene0.isFirstUtr("", true);

Test case 19

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: EmblStreamFeature emblStreamFeature0 = new EmblStreamFeature();
  3: chadoCanonicalGene0.add5PrimeUtr("d+$", emblStreamFeature0);
  4: assertEquals(0, chadoCanonicalGene0.getSeqlen());

Test case 20

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.addOtherFeatures("", (Feature) null);
  3: assertEquals(0, chadoCanonicalGene0.getSeqlen());

Test case 21

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: String[] stringArray0 = new String[9];
  3: StringVector stringVector0 = new StringVector(stringArray0);
  4: Feature feature0 = chadoCanonicalGene0.containsTranscript(stringVector0);
  5: assertNull(feature0);

Test case 22

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: Set<String> set0 = chadoCanonicalGene0.getSpliceTypes("");
  3: assertNull(set0);

Test case 23

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: List<Feature> list0 = chadoCanonicalGene0.getSplicedFeaturesOfTranscript("feature_relationship_rank");
  3: assertNull(list0);

Test case 24

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: Feature feature0 = chadoCanonicalGene0.getTranscriptFeatureFromName("");
  3: assertNull(feature0);

Test case 25

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: Feature feature0 = chadoCanonicalGene0.getProteinOfTranscript("j/b?Lawu4C|+");
  3: assertNull(feature0);

Test case 26

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: List<Feature> list0 = chadoCanonicalGene0.get3UtrOfTranscript("");
  3: assertNull(list0);

Test case 27

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: List<Feature> list0 = chadoCanonicalGene0.get5UtrOfTranscript(":exon:");
  3: assertNull(list0);

Test case 28

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: boolean boolean0 = chadoCanonicalGene0.isFirstUtr("", true);
  3: assertFalse(boolean0);

Test case 29

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: List<Feature> list0 = chadoCanonicalGene0.getOtherFeaturesOfTranscript("");
  3: assertNull(list0);

Test case 30

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: boolean boolean0 = chadoCanonicalGene0.isTranscript((String) null);
  3: assertFalse(boolean0);

Test case 31

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.autoGenerateSplicedFeatureName("gx.Dl<th");

Test case 32

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.autoGenerateSplicedFeatureName("Nnh}3sY\"]8y[J");

Test case 33

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.autoGeneratePepName("{]R_H28.HP>QcQOc");

Test case 34

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.autoGeneratePepName("");

Test case 35

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.deleteTranscript("Parent");
  3: assertEquals(0, chadoCanonicalGene0.getSrcfeature_id());

Test case 36

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.addSplicedFeatures("", (Feature) null);
  3: assertEquals(0, chadoCanonicalGene0.getSrcfeature_id());

Test case 37

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: String string0 = chadoCanonicalGene0.getTranscriptFromName("");
  3: assertNull(string0);

Test case 38

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: Key key0 = new Key(")[{QVYvg[7<PzL)wo", false);
  3: Range range0 = new Range(1014, 2453);
  4: Location location0 = new Location(range0);
  5: QualifierVector qualifierVector0 = new QualifierVector();
  6: GFFStreamFeature gFFStreamFeature0 = new GFFStreamFeature(key0, location0, qualifierVector0);
  7: String string0 = chadoCanonicalGene0.getQualifier(gFFStreamFeature0, "Rl3&nk9#^VeMoGk&dj");
  8: assertNull(string0);

Test case 39

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.addProtein("<html>", (Feature) null);

Test case 40

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.autoGenerateFeatureName("a:pep", "x<NMS,}l82Z11");

Test case 41

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.autoGenerateTanscriptName("&`}~CQ\"#kNBi:7&A9");

Test case 42

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.deleteFeature((Feature) null);

Test case 43

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.get5UtrOfTranscript((String) null);

Test case 44

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.getChildren((Feature) null);

Test case 45

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.getFeatureFromId("]u");

Test case 46

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: EmblStreamFeature emblStreamFeature0 = new EmblStreamFeature();
  3: FeatureLoc featureLoc0 = new FeatureLoc();
  4: chadoCanonicalGene0.getNucLocation(emblStreamFeature0, featureLoc0);

Test case 47

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.getQualifier((Feature) null, "\n");

Test case 48

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.getSpliceSitesOfTranscript((String) null, (String) null);

Test case 49

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: chadoCanonicalGene0.getSpliceTypes((String) null);

Test case 50

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: List<Feature> list0 = chadoCanonicalGene0.getSpliceSitesOfTranscript("org.apache.commons.io.filefilter.TrueFileFilter", "O,@e1&");
  3: assertNull(list0);

Test case 51

  1: ChadoCanonicalGene chadoCanonicalGene0 = new ChadoCanonicalGene();
  2: ChadoCanonicalGene.RangeComparator chadoCanonicalGene_RangeComparator0 = chadoCanonicalGene0.new RangeComparator();
  3: Range range0 = new Range(2145);
  4: int int0 = chadoCanonicalGene_RangeComparator0.compare(range0, range0);
  5: assertEquals(0, int0);

Source Code

  1: No source found for uk.ac.sanger.artemis.io.ChadoCanonicalGene

EvoSuite Parameters

  • TARGET_CLASS: uk.ac.sanger.artemis.io.ChadoCanonicalGene
  • Size: 51
  • Length: 123
  • criterion: LINE;BRANCH;EXCEPTION;WEAKMUTATION;OUTPUT;METHOD;METHODNOEXCEPTION;CBRANCH
  • Coverage: 0.44882263868980965
  • BranchCoverage: 0.2198581560283688
  • MethodCoverage: 1.0
  • OutputCoverage: 0.19801980198019803


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