Summary

Test suite

Test case 1

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getChrom();
  3: assertNull(string0);

Test case 2

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.toString();

Test case 3

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String[][] stringArray0 = new String[8][6];
  3: vCFRecord0.setGenoTypeData(stringArray0);
  4: String[][] stringArray1 = vCFRecord0.getGenoTypeData();
  5: assertSame(stringArray1, stringArray0);

Test case 4

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.appendFilter("z_X+|");

Test case 5

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getInfo();
  3: assertNull(string0);

Test case 6

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String[][] stringArray0 = vCFRecord0.getGenoTypeData();
  3: assertNull(stringArray0);

Test case 7

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setAlt("c?Dd4pL[tLM4|38^");
  3: vCFRecord0.getSynFlag((FeatureVector) null, 3);

Test case 8

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: int int0 = vCFRecord0.getPos();
  3: assertEquals(0, int0);

Test case 9

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: VariantBase variantBase0 = vCFRecord0.getAlt();
  3: assertNull(variantBase0);

Test case 10

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: float float0 = vCFRecord0.getQuality();
  3: assertEquals(0.0F, float0, 0.01F);

Test case 11

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setID("");

Test case 12

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getRef();
  3: assertNull(string0);

Test case 13

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getID();
  3: assertNull(string0);

Test case 14

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setInfo("PASS");
  3: vCFRecord0.containsInfoFlag("");
  4: String string0 = vCFRecord0.getInfoValue("");
  5: assertNull(string0);

Test case 15

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String[] stringArray0 = vCFRecord0.getFormatValues("T-\"v7i?C");
  3: assertNull(stringArray0);

Test case 16

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: boolean boolean0 = vCFRecord0.isMarkAsNewStop();
  3: assertFalse(boolean0);

Test case 17

  1: int int0 = VCFRecord.countOccurrences("&tJ", 'v');
  2: assertEquals(0, int0);

Test case 18

  1: int int0 = VCFRecord.countOccurrences("rootVisible", 'l');
  2: assertEquals(1, int0);

Test case 19

  1: VCFRecord.split("Could not find field while serializing", "vp>hwwQE4L@?c", 0);

Test case 20

  1: String[] stringArray0 = VCFRecord.split("\t", "\t", 2686);
  2: assertNotNull(stringArray0);

Test case 21

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.getInfoValue("..");

Test case 22

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setInfo("");
  3: boolean boolean0 = vCFRecord0.containsInfoFlag("");
  4: assertTrue(boolean0);

Test case 23

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFormat("fB{y[e4Z%x}RV;m&");
  3: vCFRecord0.getFormatValueForSample(5);

Test case 24

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getFormatValueForSample(0);
  3: assertNull(string0);

Test case 25

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getFormatValueForSample("", 58);
  3: assertNull(string0);

Test case 26

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFormat("(azKu6e@hi{z*;OM");
  3: vCFRecord0.getFormatValueForSample("(azKu6e@hi{z*;OM", (-211));

Test case 27

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFormat("iNx`m!ZR.");
  3: String string0 = vCFRecord0.getFormatValueForSample("U1JSv<?iXLNF}nAN8", (-4293));
  4: assertNull(string0);

Test case 28

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String[][] stringArray0 = new String[3][0];
  3: vCFRecord0.setGenoTypeData(stringArray0);
  4: String string0 = vCFRecord0.getSampleDataString();
  5: assertEquals("\t\t", string0);

Test case 29

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getSampleDataString();
  3: assertEquals("", string0);

Test case 30

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFilter("z_X+|");
  3: vCFRecord0.appendFilter("z_X+|");

Test case 31

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFilter("");
  3: vCFRecord0.appendFilter((String) null);

Test case 32

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.getSynFlag((FeatureVector) null, 3);

Test case 33

  1: Range range0 = new Range((-3441), 21);
  2: RangeVector rangeVector0 = new RangeVector(range0);
  3: CDSFeature cDSFeature0 = new CDSFeature(true, rangeVector0, 1048576, 0, "bi");
  4: short short0 = VCFRecord.checkSyn(cDSFeature0, 0, 'G');
  5: assertEquals((short) (-1), short0);

Test case 34

  1: RangeVector rangeVector0 = new RangeVector();
  2: CDSFeature cDSFeature0 = new CDSFeature(false, rangeVector0, (-655), (-655), (String) null);
  3: short short0 = VCFRecord.checkSyn(cDSFeature0, 396, '5');
  4: assertEquals((short) (-1), short0);

Test case 35

  1: Selection selection0 = new Selection((Clipboard) null);
  2: RangeVector rangeVector0 = selection0.getSelectionRanges();
  3: Range range0 = new Range(74, 1825);
  4: rangeVector0.add(range0);
  5: CDSFeature cDSFeature0 = new CDSFeature(false, rangeVector0, 8, 2692, "x#S");
  6: short short0 = VCFRecord.checkSyn(cDSFeature0, 1825, 'H');
  7: assertEquals((short) (-1), short0);

Test case 36

  1: Selection selection0 = new Selection((Clipboard) null);
  2: RangeVector rangeVector0 = selection0.getSelectionRanges();
  3: Range range0 = new Range(74, 1825);
  4: rangeVector0.add(range0);
  5: CDSFeature cDSFeature0 = new CDSFeature(false, rangeVector0, 8, 2692, "x#S");
  6: rangeVector0.add(range0);
  7: short short0 = VCFRecord.checkSyn(cDSFeature0, 58, 'H');
  8: assertEquals((short) (-1), short0);

Test case 37

  1: Selection selection0 = new Selection((Clipboard) null);
  2: RangeVector rangeVector0 = selection0.getSelectionRanges();
  3: Range range0 = new Range(17, 1825);
  4: rangeVector0.add(range0);
  5: CDSFeature cDSFeature0 = new CDSFeature(false, rangeVector0, 8, 2692, "x#S");
  6: short short0 = VCFRecord.checkSyn(cDSFeature0, 58, 'H');
  7: assertEquals((short)0, short0);

Test case 38

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.containsInfoFlag("The ontology may not be null");

Test case 39

  1: VCFRecord.countOccurrences((String) null, 'b');

Test case 40

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFormat("fB{y[e4Z%x}RV;m&");
  3: String[][] stringArray0 = new String[4][5];
  4: vCFRecord0.setGenoTypeData(stringArray0);
  5: vCFRecord0.getFormatValueForSample(5);

Test case 41

  1: VCFRecord.parse("", (-206));

Test case 42

  1: VCFRecord.parse((String) null, 61);

Test case 43

  1: VCFRecord.split("", "", (-1255));

Test case 44

  1: VCFRecord.split((String) null, (String) null, 58);

Test case 45

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setAlt("C[f)D]`");
  3: VariantBase variantBase0 = vCFRecord0.getAlt();
  4: assertEquals("C[f)D]`", variantBase0.toString());

Test case 46

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setChrom("wwwcache");
  3: String string0 = vCFRecord0.getChrom();
  4: assertEquals("wwwcache", string0);

Test case 47

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFilter("");
  3: String string0 = vCFRecord0.getFilter();
  4: assertEquals("", string0);

Test case 48

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFilter(" ");
  3: String string0 = vCFRecord0.getFilter();
  4: assertEquals(" ", string0);

Test case 49

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getFilter();
  3: assertNull(string0);

Test case 50

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setFormat("File already exists named ");
  3: String string0 = vCFRecord0.getFormat();
  4: assertEquals("File already exists named ", string0);

Test case 51

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: String string0 = vCFRecord0.getFormat();
  3: assertNull(string0);

Test case 52

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setInfo("");
  3: String string0 = vCFRecord0.getInfo();
  4: assertEquals("", string0);

Test case 53

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setInfo("iNx`m!ZR.");
  3: String string0 = vCFRecord0.getInfo();
  4: assertEquals("iNx`m!ZR.", string0);

Test case 54

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setPos((-35));
  3: int int0 = vCFRecord0.getPos();
  4: assertEquals((-35), int0);

Test case 55

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setPos(5);
  3: int int0 = vCFRecord0.getPos();
  4: assertEquals(5, int0);

Test case 56

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setQuality(0.106F);
  3: float float0 = vCFRecord0.getQuality();
  4: assertEquals(0.106F, float0, 0.01F);

Test case 57

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setRef("r}Pxr!n$FH");
  3: String string0 = vCFRecord0.getRef();
  4: assertEquals("r}Pxr!n$FH", string0);

Test case 58

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setMarkAsNewStop(true);
  3: boolean boolean0 = vCFRecord0.isMarkAsNewStop();
  4: assertTrue(boolean0);

Test case 59

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setAlt("C[f)D]`");
  3: String string0 = vCFRecord0.toString();
  4: assertEquals("null\t0\tnull\tnull\tC[f)D]`\t0.0\tnull\tnull\tnull\t", string0);

Test case 60

  1: VCFRecord vCFRecord0 = new VCFRecord();
  2: vCFRecord0.setAlt("Failed to read sequence file");
  3: vCFRecord0.getSynFlag((List<CDSFeature>) null, 5);

Test case 61

  1: VCFRecord.parse("d{G|As\\9\"V0", 2686);

Test case 62

  1: Clipboard clipboard0 = new Clipboard("U]");
  2: Selection selection0 = new Selection(clipboard0);
  3: RangeVector rangeVector0 = selection0.getSelectionRanges();
  4: CDSFeature cDSFeature0 = new CDSFeature(true, rangeVector0, 0, 0, "P");
  5: short short0 = VCFRecord.checkSyn(cDSFeature0, 0, '9');
  6: assertEquals((short) (-1), short0);

Test case 63

  1: Selection selection0 = new Selection((Clipboard) null);
  2: RangeVector rangeVector0 = selection0.getSelectionRanges();
  3: CDSFeature cDSFeature0 = new CDSFeature(false, rangeVector0, 55, 4468, "k]~h]8wj^S@");
  4: short short0 = VCFRecord.checkSyn(cDSFeature0, 4468, 'G');
  5: assertEquals((short) (-1), short0);

Test case 64

  1: Selection selection0 = new Selection((Clipboard) null);
  2: RangeVector rangeVector0 = selection0.getSelectionRanges();
  3: Range range0 = new Range(0);
  4: rangeVector0.add(range0);
  5: CDSFeature cDSFeature0 = new CDSFeature(false, rangeVector0, 8, 2692, "x#S");
  6: short short0 = VCFRecord.checkSyn(cDSFeature0, 58, 'H');
  7: assertEquals((short) (-1), short0);

Source Code

  1: No source found for uk.ac.sanger.artemis.components.variant.VCFRecord

EvoSuite Parameters

  • TARGET_CLASS: uk.ac.sanger.artemis.components.variant.VCFRecord
  • Size: 64
  • Length: 173
  • criterion: LINE;BRANCH;EXCEPTION;WEAKMUTATION;OUTPUT;METHOD;METHODNOEXCEPTION;CBRANCH
  • Coverage: 0.735273406916767
  • BranchCoverage: 0.6259541984732825
  • MethodCoverage: 1.0
  • OutputCoverage: 0.5588235294117647


Back to Overview